genomics

NLR diversity in sweetpotato relatives

We used an *in silico* approach to examine diversity and phylogenetic placement of sweetpotato diploid wild relative NLRs

Effector repertoire

Our efforts to identify the core effector repertoire of *Ceratocystis fimbriata*

Population biology

We used genome mined microsatellite markers to describe *Phytophthora capsici* population structure in the eastern Unite States

Renseq on hexaploid sweetpotato

Check out how we plan to use RenSeq to reveal the complete sweetpotato NLR catalog

Long read assembly via CANU using HPC

This bioinformatic notes include step by step work towards assembling long reads using canu.