Enhancing the Nextflow-based PathogenSurveillance pipeline for improved pathogen monitoring.
High-quality genome sequencing and annotation of over 100 *Phytophthora* species for phylogenomic insights.
Revealing the genomic architecture of *Phytophthora capsici* isolates from New York
We used an *in silico* approach to examine diversity and phylogenetic placement of sweetpotato diploid wild relative NLRs
Our efforts to identify the core effector repertoire of *Ceratocystis fimbriata*
We used genome mined microsatellite markers to describe *Phytophthora capsici* population structure in the eastern Unite States
Check out how we plan to use RenSeq to reveal the complete sweetpotato NLR catalog
This bioinformatic notes include step by step work towards assembling long reads using canu.